IL_6D9J_258
3D structure
- PDB id
- 6D9J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome with a double translocated CrPV-IRES, P-sitetRNA and eRF1.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GAACGCGCC*GAAGCUAAGC
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6D9J|1|7|G|21
6D9J|1|7|A|22
6D9J|1|7|A|23
6D9J|1|7|C|24
6D9J|1|7|G|25
6D9J|1|7|C|26
6D9J|1|7|G|27
6D9J|1|7|C|28
6D9J|1|7|C|29
*
6D9J|1|7|G|48
6D9J|1|7|A|49
6D9J|1|7|A|50
6D9J|1|7|G|51
6D9J|1|7|C|52
6D9J|1|7|U|53
6D9J|1|7|A|54
6D9J|1|7|A|55
6D9J|1|7|G|56
6D9J|1|7|C|57
Current chains
- Chain 7
- 5S rRNA
Nearby chains
- Chain D
- uL18
- Chain J
- uL11
Coloring options: