IL_6D9J_267
3D structure
- PDB id
- 6D9J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome with a double translocated CrPV-IRES, P-sitetRNA and eRF1.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GGGG*CGAUUCC
- Length
- 11 nucleotides
- Bulged bases
- 6D9J|1|2|U|428
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6D9J|1|2|G|410
6D9J|1|2|G|411
6D9J|1|2|G|412
6D9J|1|2|G|413
*
6D9J|1|2|C|424
6D9J|1|2|G|425
6D9J|1|2|A|426
6D9J|1|2|U|427
6D9J|1|2|U|428
6D9J|1|2|C|429
6D9J|1|2|C|430
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain FF
- eS4
- Chain KK
- uS4
- Chain YY
- uS12
Coloring options: