IL_6D9J_273

3D structure

PDB id

6D9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome with a double translocated CrPV-IRES, P-sitetRNA and eRF1.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

ACUU*AGGAAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6D9J|1|2|A|802
6D9J|1|2|C|803
6D9J|1|2|U|804
6D9J|1|2|U|805
*
6D9J|1|2|A|858
6D9J|1|2|G|859
6D9J|1|2|G|860
6D9J|1|2|A|861
6D9J|1|2|A|862
6D9J|1|2|U|863

Current chains

Chain 2

18S rRNA

Nearby chains

Chain FF

eS4

Chain II

eS7

Chain MM

uS17

Chain XX

uS8