IL_6D9J_302
3D structure
- PDB id
- 6D9J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome with a double translocated CrPV-IRES, P-sitetRNA and eRF1.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CCCUC*GCCCGGG
- Length
- 12 nucleotides
- Bulged bases
- 6D9J|1|5|C|1214, 6D9J|1|5|C|1215
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6D9J|1|5|C|1080
6D9J|1|5|C|1081
6D9J|1|5|C|1082
6D9J|1|5|U|1083
6D9J|1|5|C|1084
*
6D9J|1|5|G|1213
6D9J|1|5|C|1214
6D9J|1|5|C|1215
6D9J|1|5|C|1216
6D9J|1|5|G|1217
6D9J|1|5|G|1218
6D9J|1|5|G|1219
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain F
- uL30
- Chain b
- eL29
Coloring options: