IL_6D9J_325
3D structure
- PDB id
- 6D9J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome with a double translocated CrPV-IRES, P-sitetRNA and eRF1.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUUGUUGCCAU*AGGCGGAACGAU
- Length
- 23 nucleotides
- Bulged bases
- 6D9J|1|5|C|4720
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6D9J|1|5|G|4575
6D9J|1|5|U|4576
6D9J|1|5|U|4577
6D9J|1|5|G|4578
6D9J|1|5|U|4579
6D9J|1|5|U|4580
6D9J|1|5|G|4581
6D9J|1|5|C|4582
6D9J|1|5|C|4583
6D9J|1|5|A|4584
6D9J|1|5|U|4585
*
6D9J|1|5|A|4717
6D9J|1|5|G|4718
6D9J|1|5|G|4719
6D9J|1|5|C|4720
6D9J|1|5|G|4721
6D9J|1|5|G|4722
6D9J|1|5|A|4723
6D9J|1|5|A|4724
6D9J|1|5|C|4725
6D9J|1|5|G|4726
6D9J|1|5|A|4727
6D9J|1|5|U|4728
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain B
- uL3
- Chain O
- uL13
Coloring options: