IL_6DCC_001

3D structure

PDB id

6DCC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of methylphosphate capping enzyme methyltransferase domain in complex with 5' end of 7SK RNA

Experimental method

X-RAY DIFFRACTION

Resolution

2.1 Å

Loop

Sequence

AUG*CCGCU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_89984.2

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

3

Unit IDs

6DCC|1|B|A|3
6DCC|1|B|U|4
6DCC|1|B|G|5
*
6DCC|1|B|C|102
6DCC|1|B|C|103
6DCC|1|B|G|104
6DCC|1|B|C|105
6DCC|1|B|U|106

Current chains

Chain B

human 7SK RNA stem-loop 1 proximal methylated

Nearby chains

Chain A

7SK snRNA methylphosphate capping enzyme