IL_6DNC_041
3D structure
- PDB id
- 6DNC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GG*CAC
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6DNC_041 not in the Motif Atlas
- Homologous match to IL_6CZR_150
- Geometric discrepancy: 0.2959
- The information below is about IL_6CZR_150
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6DNC|1|A|G|953
6DNC|1|A|G|954
*
6DNC|1|A|C|1226
6DNC|1|A|A|1227
6DNC|1|A|C|1228
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain FB
- 30S ribosomal protein S19
- Chain LA
- Transfer RNA; tRNA
- Chain MA
- Peptide chain release factor 1
- Chain ZA
- 30S ribosomal protein S13
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