IL_6DNC_126
3D structure
- PDB id
- 6DNC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GAGAAC*GAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6DNC_126 not in the Motif Atlas
- Homologous match to IL_7RQB_064
- Geometric discrepancy: 0.0977
- The information below is about IL_7RQB_064
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_12566.2
- Basepair signature
- cWW-L-tHS-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
6DNC|1|B|G|1651
6DNC|1|B|A|1652
6DNC|1|B|G|1653
6DNC|1|B|A|1654
6DNC|1|B|A|1655
6DNC|1|B|C|1656
*
6DNC|1|B|G|2004
6DNC|1|B|A|2005
6DNC|1|B|C|2006
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain G
- 50S ribosomal protein L3
- Chain R
- 50S ribosomal protein L17
Coloring options: