IL_6DNC_149
3D structure
- PDB id
- 6DNC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GGAGG*CGACCUUGAAAUAC
- Length
- 19 nucleotides
- Bulged bases
- 6DNC|1|B|G|2168, 6DNC|1|B|U|2172
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6DNC|1|B|G|2124
6DNC|1|B|G|2125
6DNC|1|B|A|2126
6DNC|1|B|G|2127
6DNC|1|B|G|2128
*
6DNC|1|B|C|2161
6DNC|1|B|G|2162
6DNC|1|B|A|2163
6DNC|1|B|C|2164
6DNC|1|B|C|2165
6DNC|1|B|U|2166
6DNC|1|B|U|2167
6DNC|1|B|G|2168
6DNC|1|B|A|2169
6DNC|1|B|A|2170
6DNC|1|B|A|2171
6DNC|1|B|U|2172
6DNC|1|B|A|2173
6DNC|1|B|C|2174
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain D
- Transfer RNA; tRNA
- Chain E
- 50S ribosomal protein L1
Coloring options: