IL_6DNC_185
3D structure
- PDB id
- 6DNC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AAUUC*GUUAU
- Length
- 10 nucleotides
- Bulged bases
- 6DNC|1|B|U|931
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6DNC_185 not in the Motif Atlas
- Homologous match to IL_5J7L_399
- Geometric discrepancy: 0.2447
- The information below is about IL_5J7L_399
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_96236.1
- Basepair signature
- cWW-tWW-cWW-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
6DNC|1|B|A|844
6DNC|1|B|A|845
6DNC|1|B|U|846
6DNC|1|B|U|847
6DNC|1|B|C|848
*
6DNC|1|B|G|930
6DNC|1|B|U|931
6DNC|1|B|U|932
6DNC|1|B|A|933
6DNC|1|B|U|934
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain DA
- 50S ribosomal protein L30
Coloring options: