IL_6DTI_063
3D structure
- PDB id
- 6DTI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Thermus thermophilus 30S ribosomal subunit complexed with an unmodifed anticodon stem loop (ASL) of Escherichia coli transfer RNA Arginine 2 (TRNAARG2) bound to an mRNA with an CGU-codon in the A-site and paromomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.54 Å
Loop
- Sequence
- AGUUGCCAGCG*CGGGCACUCU
- Length
- 21 nucleotides
- Bulged bases
- 6DTI|1|A|U|1103, 6DTI|1|A|U|1104, 6DTI|1|A|C|1107
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6DTI|1|A|A|1101
6DTI|1|A|G|1102
6DTI|1|A|U|1103
6DTI|1|A|U|1104
6DTI|1|A|G|1105
6DTI|1|A|C|1106
6DTI|1|A|C|1107
6DTI|1|A|A|1108
6DTI|1|A|G|1109
6DTI|1|A|C|1110
6DTI|1|A|G|1111
*
6DTI|1|A|C|1119
6DTI|1|A|G|1120
6DTI|1|A|G|1121
6DTI|1|A|G|1122
6DTI|1|A|C|1123
6DTI|1|A|A|1124
6DTI|1|A|C|1125
6DTI|1|A|U|1126
6DTI|1|A|C|1127
6DTI|1|A|U|1128
Current chains
- Chain A
- 16s rRNA
Nearby chains
- Chain I
- 30S ribosomal protein S9
- Chain J
- 30S ribosomal protein S10
Coloring options: