IL_6DZI_035
3D structure
- PDB id
- 6DZI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.46 Å
Loop
- Sequence
- CCG*CG
- Length
- 5 nucleotides
- Bulged bases
- 6DZI|1|A|C|1113
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6DZI_035 not in the Motif Atlas
- Homologous match to IL_7RQB_035
- Geometric discrepancy: 0.1661
- The information below is about IL_7RQB_035
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_61258.12
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 40
Unit IDs
6DZI|1|A|C|1112
6DZI|1|A|C|1113
6DZI|1|A|G|1114
*
6DZI|1|A|C|1278
6DZI|1|A|G|1279
Current chains
- Chain A
- 23 S rRNA (3119-MER)
Nearby chains
- Chain K
- 50S ribosomal protein L13
- Chain R
- 50S ribosomal protein L20
- Chain S
- 50S ribosomal protein L21
- Chain a
- 50S ribosomal protein L30
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