IL_6DZI_164
3D structure
- PDB id
- 6DZI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.46 Å
Loop
- Sequence
- UGCAU*AUG
- Length
- 8 nucleotides
- Bulged bases
- 6DZI|1|h|C|1034
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6DZI_164 not in the Motif Atlas
- Homologous match to IL_4LFB_044
- Geometric discrepancy: 0.2116
- The information below is about IL_4LFB_044
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_82453.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
6DZI|1|h|U|1032
6DZI|1|h|G|1033
6DZI|1|h|C|1034
6DZI|1|h|A|1035
6DZI|1|h|U|1036
*
6DZI|1|h|A|1185
6DZI|1|h|U|1186
6DZI|1|h|G|1187
Current chains
- Chain h
- 16S rRNA
Nearby chains
- Chain 9
- 30S ribosomal protein S14
- Chain Y
- Ribosome hibernation promoting factor
- Chain k
- 30S ribosomal protein S3
- Chain s
- 30S ribosomal protein S10
Coloring options: