IL_6DZI_206
3D structure
- PDB id
- 6DZI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.46 Å
Loop
- Sequence
- GACC*GGAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6DZI_206 not in the Motif Atlas
- Homologous match to IL_9DFE_108
- Geometric discrepancy: 0.261
- The information below is about IL_9DFE_108
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_34942.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
6DZI|1|A|G|3064
6DZI|1|A|A|3065
6DZI|1|A|C|3066
6DZI|1|A|C|3067
*
6DZI|1|A|G|3091
6DZI|1|A|G|3092
6DZI|1|A|A|3093
6DZI|1|A|A|3094
6DZI|1|A|C|3095
Current chains
- Chain A
- 23 S rRNA (3119-MER)
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain O
- 50S ribosomal protein L17
- Chain Q
- 50S ribosomal protein L19
Coloring options: