Motif IL_34942.1 Version IL_34942.1 of this group appears in releases 4.1 to 4.1
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 1-9 | 2-3 | 2-8 | 3-8 | 4-7 | 5-6 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5WTI_001 | 5WTI | 0.6150 | 1 | Other IL | B | RNA (123-MER) | G | 0 | C | 1 | A | 3 | G | 4 | G | 5 | * | C | 25 | A | 26 | A | 27 | C | 28 | cWW | ncWW | cWW | |||
| 2 | IL_9DFE_108 | 9DFE | 0.0000 | 0 | 1A | LSU rRNA | C | 2870 | C | 2871 | G | 2872 | A | 2873 | C | 2874 | * | G | 2843 | G | 2844 | G | 2845 | G | 2846 | cWW | cSW | cWW | ||||
| 3 | IL_9E6Q_030 | 9E6Q | 0.8046 | 0 | 1 | LSU rRNA | G | 855 | G | 856 | U | 857 | U | 858 | C | 859 | * | G | 873 | U | 874 | OMU | 875 | C | 876 | cWW | cSH | cWw | cWw | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCGAGG*CAAC | 1 |
| CCGAC*GGGG | 1 |
| GGUUC*GU(OMU)C | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CGAG*AA | 1 |
| CGA*GG | 1 |
| GUU*U(OMU) | 1 |
Release history
| Release | 4.1 |
|---|---|
| Date | 2025-09-10 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Other IL (1)
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Heat map statistics
- Min 0.62 | Avg 0.53 | Max 0.97
Coloring options: