IL_6EK0_186

3D structure

PDB id

6EK0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

High-resolution cryo-EM structure of the human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAUU*ACCUCGGG

Length

12 nucleotides

Bulged bases

6EK0|1|S2|U|305, 6EK0|1|S2|G|307

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6EK0|1|S2|C|216
6EK0|1|S2|A|217
6EK0|1|S2|U|218
6EK0|1|S2|U|219
*
6EK0|1|S2|A|302
6EK0|1|S2|C|303
6EK0|1|S2|C|304
6EK0|1|S2|U|305
6EK0|1|S2|C|306
6EK0|1|S2|G|307
6EK0|1|S2|G|308
6EK0|1|S2|G|309

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SE

40S ribosomal protein S4, X isoform

Chain SI

40S ribosomal protein S8