IL_6EK0_191
3D structure
- PDB id
- 6EK0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution cryo-EM structure of the human 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUUCGA*UG
- Length
- 8 nucleotides
- Bulged bases
- 6EK0|1|S2|U|368, 6EK0|1|S2|C|369
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6EK0_191 not in the Motif Atlas
- Geometric match to IL_5Y58_001
- Geometric discrepancy: 0.2784
- The information below is about IL_5Y58_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37738.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
6EK0|1|S2|U|366
6EK0|1|S2|U|367
6EK0|1|S2|U|368
6EK0|1|S2|C|369
6EK0|1|S2|G|370
6EK0|1|S2|A|371
*
6EK0|1|S2|U|393
6EK0|1|S2|G|394
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain LR
- 60S ribosomal protein L19
- Chain SI
- 40S ribosomal protein S8
- Chain SL
- 40S ribosomal protein S11
Coloring options: