3D structure

PDB id
6ELZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosmes
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
GAAUGUAG*UAUUAUAGC
Length
17 nucleotides
Bulged bases
6ELZ|1|1|U|534, 6ELZ|1|1|U|558
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6ELZ|1|1|G|531
6ELZ|1|1|A|532
6ELZ|1|1|A|533
6ELZ|1|1|U|534
6ELZ|1|1|G|535
6ELZ|1|1|U|536
6ELZ|1|1|A|537
6ELZ|1|1|G|538
*
6ELZ|1|1|U|553
6ELZ|1|1|A|554
6ELZ|1|1|U|555
6ELZ|1|1|U|556
6ELZ|1|1|A|557
6ELZ|1|1|U|558
6ELZ|1|1|A|559
6ELZ|1|1|G|560
6ELZ|1|1|C|561

Current chains

Chain 1
25S ribosomal RNA

Nearby chains

Chain M
60S ribosomal protein L14-A
Chain S
60S ribosomal protein L20-A

Coloring options:

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