IL_6ELZ_053
3D structure
- PDB id
- 6ELZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosmes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GGA*UUUC
- Length
- 7 nucleotides
- Bulged bases
- 6ELZ|1|1|U|1821
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ELZ_053 not in the Motif Atlas
- Geometric match to IL_6CZR_128
- Geometric discrepancy: 0.3239
- The information below is about IL_6CZR_128
- Detailed Annotation
- Single bulged G, near cWW
- Broad Annotation
- Single bulged G, near cWW
- Motif group
- IL_52767.5
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 28
Unit IDs
6ELZ|1|1|G|1623
6ELZ|1|1|G|1624
6ELZ|1|1|A|1625
*
6ELZ|1|1|U|1819
6ELZ|1|1|U|1820
6ELZ|1|1|U|1821
6ELZ|1|1|C|1822
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain g
- 60S ribosomal protein L34-A
- Chain m
- Ribosome biogenesis protein ERB1
- Chain n
- Pescadillo homolog
- Chain t
- Ribosome biogenesis protein RLP7
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