IL_6ELZ_069

3D structure

PDB id

6ELZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosmes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UGAC*GUAA

Length

8 nucleotides

Bulged bases

6ELZ|1|1|G|2418

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ELZ|1|1|U|2417
6ELZ|1|1|G|2418
6ELZ|1|1|A|2419
6ELZ|1|1|C|2420
*
6ELZ|1|1|G|2610
6ELZ|1|1|U|2611
6ELZ|1|1|A|2802
6ELZ|1|1|A|2803

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain l

60S ribosome subunit biogenesis protein NIP7

Chain q

25S rRNA (cytosine(2870)-C(5))-methyltransferase