3D structure

PDB id
6ELZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosmes
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
AGACG*CCCGUGAAAAU
Length
16 nucleotides
Bulged bases
6ELZ|1|1|C|1793
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6ELZ|1|1|A|1654
6ELZ|1|1|G|1655
6ELZ|1|1|A|1656
6ELZ|1|1|C|1657
6ELZ|1|1|G|1658
*
6ELZ|1|1|C|1791
6ELZ|1|1|C|1792
6ELZ|1|1|C|1793
6ELZ|1|1|G|1794
6ELZ|1|1|U|1795
6ELZ|1|1|G|1796
6ELZ|1|1|A|1797
6ELZ|1|1|A|1798
6ELZ|1|1|A|1799
6ELZ|1|1|A|1800
6ELZ|1|1|U|1801

Current chains

Chain 1
25S ribosomal RNA

Nearby chains

Chain I
Nucleolar complex-associated protein 3
Chain g
60S ribosomal protein L34-A
Chain n
Pescadillo homolog

Coloring options:

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