IL_6ENF_040

3D structure

PDB id

6ENF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AGGA*UUAAAGAAAGCGUAAUAGCUCACU

Length

28 nucleotides

Bulged bases

6ENF|1|A|A|1088, 6ENF|1|A|A|1095

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ENF|1|A|A|1054
6ENF|1|A|G|1055
6ENF|1|A|G|1056
6ENF|1|A|A|1057
*
6ENF|1|A|U|1082
6ENF|1|A|U|1083
6ENF|1|A|A|1084
6ENF|1|A|A|1085
6ENF|1|A|A|1086
6ENF|1|A|G|1087
6ENF|1|A|A|1088
6ENF|1|A|A|1089
6ENF|1|A|A|1090
6ENF|1|A|G|1091
6ENF|1|A|C|1092
6ENF|1|A|G|1093
6ENF|1|A|U|1094
6ENF|1|A|A|1095
6ENF|1|A|A|1096
6ENF|1|A|U|1097
6ENF|1|A|A|1098
6ENF|1|A|G|1099
6ENF|1|A|C|1100
6ENF|1|A|U|1101
6ENF|1|A|C|1102
6ENF|1|A|A|1103
6ENF|1|A|C|1104
6ENF|1|A|U|1105

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 4

50S ribosomal protein L36

Chain G

50S ribosomal protein L6