IL_6ENF_083

3D structure

PDB id

6ENF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UUC*GG

Length

5 nucleotides

Bulged bases

6ENF|1|A|U|2402

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ENF_083 not in the Motif Atlas

Geometric match to IL_9AXU_122

Geometric discrepancy: 0.3412

The information below is about IL_9AXU_122

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_97561.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

147

Unit IDs

6ENF|1|A|U|2401
6ENF|1|A|U|2402
6ENF|1|A|C|2403
*
6ENF|1|A|G|2414
6ENF|1|A|G|2415

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L33

Chain 3

50S ribosomal protein L35

Chain L

50S ribosomal protein L15