IL_6ENF_189

3D structure

PDB id

6ENF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

6ENF|1|A|G|277

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ENF_189 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.2076

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

6ENF|1|A|C|274
6ENF|1|A|C|275
6ENF|1|A|U|276
6ENF|1|A|G|277
6ENF|1|A|A|278
6ENF|1|A|A|279
6ENF|1|A|U|280
6ENF|1|A|C|281
*
6ENF|1|A|G|359
6ENF|1|A|U|360
6ENF|1|A|G|361
6ENF|1|A|A|362
6ENF|1|A|G|363

Current chains

Chain A

23S ribosomal RNA

Nearby chains