IL_6ENJ_016

3D structure

PDB id

6ENJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAAAC*GAGAUAGC

Length

13 nucleotides

Bulged bases

6ENJ|1|A|G|801, 6ENJ|1|A|G|805

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ENJ_016 not in the Motif Atlas

Homologous match to IL_5J7L_260

Geometric discrepancy: 0.1454

The information below is about IL_5J7L_260

Detailed Annotation

tHW-tHW cross-strand stack

Broad Annotation

No text annotation

Motif group

IL_54041.2

Basepair signature

cWW-L-R-L-R-tWH-L-cWW

Number of instances in this motif group

7

Unit IDs

6ENJ|1|A|G|674
6ENJ|1|A|A|675
6ENJ|1|A|A|676
6ENJ|1|A|A|677
6ENJ|1|A|C|678
*
6ENJ|1|A|G|799
6ENJ|1|A|A|800
6ENJ|1|A|G|801
6ENJ|1|A|A|802
6ENJ|1|A|U|803
6ENJ|1|A|A|804
6ENJ|1|A|G|805
6ENJ|1|A|C|806

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain L

50S ribosomal protein L15