IL_6ENJ_067

3D structure

PDB id

6ENJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UGAGG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ENJ_067 not in the Motif Atlas

Homologous match to IL_5J7L_310

Geometric discrepancy: 0.1635

The information below is about IL_5J7L_310

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_50730.2

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

19

Unit IDs

6ENJ|1|A|U|1720
6ENJ|1|A|G|1721
6ENJ|1|A|A|1722
6ENJ|1|A|G|1723
6ENJ|1|A|G|1724
*
6ENJ|1|A|U|1736
6ENJ|1|A|G|1737
6ENJ|1|A|G|1738
6ENJ|1|A|A|1739
6ENJ|1|A|G|1740

Current chains

Chain A

23S Ribosomal RNA

Nearby chains