IL_6ENJ_147

3D structure

PDB id

6ENJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UGA*UACA

Length

7 nucleotides

Bulged bases

6ENJ|1|a|A|1394

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ENJ_147 not in the Motif Atlas

Geometric match to IL_4KYY_002

Geometric discrepancy: 0.3057

The information below is about IL_4KYY_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_71625.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

78

Unit IDs

6ENJ|1|a|U|921
6ENJ|1|a|G|922
6ENJ|1|a|A|923
*
6ENJ|1|a|U|1393
6ENJ|1|a|A|1394
6ENJ|1|a|C|1395
6ENJ|1|a|A|1396

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain e

30S ribosomal protein S5