IL_6ENJ_153

3D structure

PDB id

6ENJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUGC*GCC

Length

7 nucleotides

Bulged bases

6ENJ|1|a|U|1049

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ENJ_153 not in the Motif Atlas

Geometric match to IL_4V8Q_188

Geometric discrepancy: 0.2591

The information below is about IL_4V8Q_188

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

6ENJ|1|a|G|1048
6ENJ|1|a|U|1049
6ENJ|1|a|G|1050
6ENJ|1|a|C|1051
*
6ENJ|1|a|G|1207
6ENJ|1|a|C|1208
6ENJ|1|a|C|1209

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain 9

Transfer RNA; tRNA

Chain c

30S ribosomal protein S3

Chain n

30S ribosomal protein S14