IL_6ENJ_179
3D structure
- PDB id
- 6ENJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GGCAAG*CAACCC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ENJ_179 not in the Motif Atlas
- Geometric match to IL_1L9A_008
- Geometric discrepancy: 0.3565
- The information below is about IL_1L9A_008
- Detailed Annotation
- tSH-tHW-tHS-cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_71294.3
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
6ENJ|1|A|G|874
6ENJ|1|A|G|875
6ENJ|1|A|C|876
6ENJ|1|A|A|877
6ENJ|1|A|A|878
6ENJ|1|A|G|879
*
6ENJ|1|A|C|898
6ENJ|1|A|A|899
6ENJ|1|A|A|900
6ENJ|1|A|C|901
6ENJ|1|A|C|902
6ENJ|1|A|C|903
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 9
- Transfer RNA; tRNA
- Chain M
- 50S ribosomal protein L16
Coloring options: