IL_6ENJ_188

3D structure

PDB id

6ENJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UGC*GAUG

Length

7 nucleotides

Bulged bases

6ENJ|1|A|A|1981

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ENJ_188 not in the Motif Atlas

Geometric match to IL_3SZX_001

Geometric discrepancy: 0.2347

The information below is about IL_3SZX_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

214

Unit IDs

6ENJ|1|A|U|1769
6ENJ|1|A|G|1770
6ENJ|1|A|C|1771
*
6ENJ|1|A|G|1980
6ENJ|1|A|A|1981
6ENJ|1|A|U|1982
6ENJ|1|A|G|1983

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain a

Small subunit ribosomal RNA; SSU rRNA