IL_6ENU_043

3D structure

PDB id

6ENU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUGCGAAG*UGGAG

Length

13 nucleotides

Bulged bases

6ENU|1|A|C|1211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ENU_043 not in the Motif Atlas

Homologous match to IL_5J7L_288

Geometric discrepancy: 0.0831

The information below is about IL_5J7L_288

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_70923.9

Basepair signature

cWW-tSS-tSH-L-tHS-tHS-cWW

Number of instances in this motif group

27

Unit IDs

6ENU|1|A|C|1208
6ENU|1|A|U|1209
6ENU|1|A|G|1210
6ENU|1|A|C|1211
6ENU|1|A|G|1212
6ENU|1|A|A|1213
6ENU|1|A|A|1214
6ENU|1|A|G|1215
*
6ENU|1|A|U|1234
6ENU|1|A|G|1235
6ENU|1|A|G|1236
6ENU|1|A|A|1237
6ENU|1|A|G|1238

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain Q

50S ribosomal protein L20