3D structure

PDB id
6ENU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
GUGUAGGAUAG*CC
Length
13 nucleotides
Bulged bases
6ENU|1|A|U|2111, 6ENU|1|A|G|2116, 6ENU|1|A|U|2118
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6ENU_082 not in the Motif Atlas
Homologous match to IL_3U4M_002
Geometric discrepancy: 0.598
The information below is about IL_3U4M_002
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_32056.1
Basepair signature
cWW-L-cWW-L-L-tWH-R-L-R-L
Number of instances in this motif group
3

Unit IDs

6ENU|1|A|G|2110
6ENU|1|A|U|2111
6ENU|1|A|G|2112
6ENU|1|A|U|2113
6ENU|1|A|A|2114
6ENU|1|A|G|2115
6ENU|1|A|G|2116
6ENU|1|A|A|2117
6ENU|1|A|U|2118
6ENU|1|A|A|2119
6ENU|1|A|G|2120
*
6ENU|1|A|C|2178
6ENU|1|A|C|2179

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain 7
50S ribosomal protein L1
Chain g
30S ribosomal protein S7

Coloring options:


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