IL_6ENU_125

3D structure

PDB id

6ENU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGAUAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

6ENU|1|a|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ENU_125 not in the Motif Atlas

Homologous match to IL_5J7L_012

Geometric discrepancy: 0.137

The information below is about IL_5J7L_012

Detailed Annotation

tWH-tWH-tHW-tHW

Broad Annotation

No text annotation

Motif group

IL_80604.6

Basepair signature

cWW-cWW-tWH-tWH-tHW-tHW-cWW

Number of instances in this motif group

3

Unit IDs

6ENU|1|a|G|147
6ENU|1|a|G|148
6ENU|1|a|A|149
6ENU|1|a|U|150
6ENU|1|a|A|151
6ENU|1|a|A|152
6ENU|1|a|C|153
*
6ENU|1|a|G|168
6ENU|1|a|C|169
6ENU|1|a|U|170
6ENU|1|a|A|171
6ENU|1|a|A|172
6ENU|1|a|U|173
6ENU|1|a|A|174
6ENU|1|a|C|175

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain t

30S ribosomal protein S20