IL_6ENU_187

3D structure

PDB id

6ENU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ENU_187 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.1068

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

6ENU|1|A|U|1851
6ENU|1|A|U|1852
6ENU|1|A|A|1853
6ENU|1|A|A|1854
6ENU|1|A|U|1855
6ENU|1|A|U|1856
6ENU|1|A|G|1857
6ENU|1|A|A|1858
6ENU|1|A|U|1859
6ENU|1|A|G|1860
*
6ENU|1|A|U|1882
6ENU|1|A|U|1883
6ENU|1|A|G|1884
6ENU|1|A|A|1885
6ENU|1|A|U|1886
6ENU|1|A|C|1887
6ENU|1|A|G|1888
6ENU|1|A|A|1889
6ENU|1|A|A|1890
6ENU|1|A|G|1891

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 7

50S ribosomal protein L1