IL_6ENU_190

3D structure

PDB id

6ENU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UCGAA*UGG

Length

8 nucleotides

Bulged bases

6ENU|1|a|G|64, 6ENU|1|a|A|65

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ENU_190 not in the Motif Atlas

Geometric match to IL_5TBW_145

Geometric discrepancy: 0.2744

The information below is about IL_5TBW_145

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_54650.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

16

Unit IDs

6ENU|1|a|U|62
6ENU|1|a|C|63
6ENU|1|a|G|64
6ENU|1|a|A|65
6ENU|1|a|A|66
*
6ENU|1|a|U|103
6ENU|1|a|G|104
6ENU|1|a|G|105

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain t

30S ribosomal protein S20