IL_6ERI_003
3D structure
- PDB id
- 6ERI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GGGAG*CAGAGAUC
- Length
- 13 nucleotides
- Bulged bases
- 6ERI|1|AA|A|99
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ERI_003 not in the Motif Atlas
- Homologous match to IL_7RQB_004
- Geometric discrepancy: 0.1856
- The information below is about IL_7RQB_004
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_45067.2
- Basepair signature
- cWW-tSS-L-tSH-L-R-R-cWW-L
- Number of instances in this motif group
- 18
Unit IDs
6ERI|1|AA|G|80
6ERI|1|AA|G|81
6ERI|1|AA|G|82
6ERI|1|AA|A|83
6ERI|1|AA|G|84
*
6ERI|1|AA|C|96
6ERI|1|AA|A|97
6ERI|1|AA|G|98
6ERI|1|AA|A|99
6ERI|1|AA|G|100
6ERI|1|AA|A|101
6ERI|1|AA|U|102
6ERI|1|AA|C|103
Current chains
- Chain AA
- 23S ribosomal RNA
Nearby chains
- Chain AU
- 50S ribosomal protein L24, chloroplastic
- Chain AY
- 50S ribosomal protein L29, chloroplastic
Coloring options: