IL_6ERI_007
3D structure
- PDB id
- 6ERI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGUAGUAG*CGAAAUG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ERI_007 not in the Motif Atlas
- Homologous match to IL_4WF9_009
- Geometric discrepancy: 0.1111
- The information below is about IL_4WF9_009
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_62167.3
- Basepair signature
- cWW-cWW-tSH-cSH-R-tWH-tHS-cWW
- Number of instances in this motif group
- 20
Unit IDs
6ERI|1|AA|C|223
6ERI|1|AA|G|224
6ERI|1|AA|U|225
6ERI|1|AA|A|226
6ERI|1|AA|G|227
6ERI|1|AA|U|228
6ERI|1|AA|A|229
6ERI|1|AA|G|230
*
6ERI|1|AA|C|238
6ERI|1|AA|G|239
6ERI|1|AA|A|240
6ERI|1|AA|A|241
6ERI|1|AA|A|242
6ERI|1|AA|U|243
6ERI|1|AA|G|244
Current chains
- Chain AA
- 23S ribosomal RNA
Nearby chains
- Chain AL
- 50S ribosomal protein L15, chloroplastic
- Chain Ad
- 50S ribosomal protein L35, chloroplastic
Coloring options: