IL_6ERI_015
3D structure
- PDB id
- 6ERI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GGAG*UGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ERI_015 not in the Motif Atlas
- Homologous match to IL_5J7L_256
- Geometric discrepancy: 0.2723
- The information below is about IL_5J7L_256
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.15
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 34
Unit IDs
6ERI|1|AA|G|547
6ERI|1|AA|G|548
6ERI|1|AA|A|549
6ERI|1|AA|G|550
*
6ERI|1|AA|U|564
6ERI|1|AA|G|565
6ERI|1|AA|A|566
6ERI|1|AA|C|567
Current chains
- Chain AA
- 23S ribosomal RNA
Nearby chains
- Chain AJ
- 50S ribosomal protein L13, chloroplastic
- Chain AQ
- 50S ribosomal protein L20, chloroplastic
Coloring options: