IL_6ERI_049
3D structure
- PDB id
- 6ERI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUAAG*CGAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ERI_049 not in the Motif Atlas
- Homologous match to IL_7A0S_048
- Geometric discrepancy: 0.1184
- The information below is about IL_7A0S_048
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- UAA/GAN
- Motif group
- IL_89021.4
- Basepair signature
- cWW-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
6ERI|1|AA|C|1372
6ERI|1|AA|U|1373
6ERI|1|AA|A|1374
6ERI|1|AA|A|1375
6ERI|1|AA|G|1376
*
6ERI|1|AA|C|1397
6ERI|1|AA|G|1398
6ERI|1|AA|A|1399
6ERI|1|AA|U|1400
6ERI|1|AA|G|1401
Current chains
- Chain AA
- 23S ribosomal RNA
Nearby chains
- Chain AC
- 50S ribosomal protein L2, chloroplastic
- Chain Ac
- 50S ribosomal protein L34, chloroplastic
- Chain Aw
- 50S ribosomal protein 5 alpha, chloroplastic
Coloring options: