IL_6ERI_059

3D structure

PDB id

6ERI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGACCCGGGUAAGAAG*CGAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ERI|1|AA|U|1500
6ERI|1|AA|G|1501
6ERI|1|AA|A|1502
6ERI|1|AA|C|1503
6ERI|1|AA|C|1504
6ERI|1|AA|C|1505
6ERI|1|AA|G|1515
6ERI|1|AA|G|1516
6ERI|1|AA|G|1517
6ERI|1|AA|U|1518
6ERI|1|AA|A|1519
6ERI|1|AA|A|1520
6ERI|1|AA|G|1521
6ERI|1|AA|A|1522
6ERI|1|AA|A|1523
6ERI|1|AA|G|1524
*
6ERI|1|AA|C|1542
6ERI|1|AA|G|1543
6ERI|1|AA|A|1544
6ERI|1|AA|G|1545

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain Aw

50S ribosomal protein 5 alpha, chloroplastic