IL_6ERI_084
3D structure
- PDB id
- 6ERI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CAAG*CGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ERI_084 not in the Motif Atlas
- Homologous match to IL_7RQB_089
- Geometric discrepancy: 0.1168
- The information below is about IL_7RQB_089
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.10
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 33
Unit IDs
6ERI|1|AA|C|2367
6ERI|1|AA|A|2368
6ERI|1|AA|A|2369
6ERI|1|AA|G|2370
*
6ERI|1|AA|C|2381
6ERI|1|AA|G|2382
6ERI|1|AA|A|2383
6ERI|1|AA|G|2384
Current chains
- Chain AA
- 23S ribosomal RNA
Nearby chains
- Chain AW
- 50S ribosomal protein L27, chloroplastic
- Chain Ad
- 50S ribosomal protein L35, chloroplastic
Coloring options: