IL_6ERI_103
3D structure
- PDB id
- 6ERI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAUAAC*GUAAGC
- Length
- 12 nucleotides
- Bulged bases
- 6ERI|1|AA|A|2783
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ERI_103 not in the Motif Atlas
- Homologous match to IL_7RQB_107
- Geometric discrepancy: 0.1486
- The information below is about IL_7RQB_107
- Detailed Annotation
- UAA/GAN with extra cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_49767.5
- Basepair signature
- cWW-cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
6ERI|1|AA|G|2755
6ERI|1|AA|A|2756
6ERI|1|AA|U|2757
6ERI|1|AA|A|2758
6ERI|1|AA|A|2759
6ERI|1|AA|C|2760
*
6ERI|1|AA|G|2780
6ERI|1|AA|U|2781
6ERI|1|AA|A|2782
6ERI|1|AA|A|2783
6ERI|1|AA|G|2784
6ERI|1|AA|C|2785
Current chains
- Chain AA
- 23S ribosomal RNA
Nearby chains
- Chain AD
- 50S ribosomal protein L3, chloroplastic
- Chain AG
- 50S ribosomal protein L6, chloroplastic
- Chain AJ
- 50S ribosomal protein L13, chloroplastic
- Chain Ae
- 50S ribosomal protein L36, chloroplastic
Coloring options: