IL_6ERI_153
3D structure
- PDB id
- 6ERI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UGCAU*AUG
- Length
- 8 nucleotides
- Bulged bases
- 6ERI|1|BA|C|1004
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ERI_153 not in the Motif Atlas
- Homologous match to IL_4LFB_044
- Geometric discrepancy: 0.102
- The information below is about IL_4LFB_044
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_82453.2
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
6ERI|1|BA|U|1002
6ERI|1|BA|G|1003
6ERI|1|BA|C|1004
6ERI|1|BA|A|1005
6ERI|1|BA|U|1006
*
6ERI|1|BA|A|1153
6ERI|1|BA|U|1154
6ERI|1|BA|G|1155
Current chains
- Chain BA
- 16S ribosomal RNA
Nearby chains
- Chain BC
- 30S ribosomal protein S3, chloroplastic
- Chain BJ
- 30S ribosomal protein S10 alpha, chloroplastic
- Chain BN
- 30S ribosomal protein S14, chloroplastic
- Chain BV
- Ribosome-binding factor PSRP1, chloroplastic
Coloring options: