IL_6ERI_156
3D structure
- PDB id
- 6ERI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ERI_156 not in the Motif Atlas
- Geometric match to IL_5J7L_050
- Geometric discrepancy: 0.1064
- The information below is about IL_5J7L_050
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_28037.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 65
Unit IDs
6ERI|1|BA|G|1011
6ERI|1|BA|U|1012
6ERI|1|BA|C|1013
*
6ERI|1|BA|G|1142
6ERI|1|BA|U|1143
6ERI|1|BA|C|1144
Current chains
- Chain BA
- 16S ribosomal RNA
Nearby chains
- Chain BC
- 30S ribosomal protein S3, chloroplastic
- Chain BE
- 30S ribosomal protein S5, chloroplastic
- Chain BJ
- 30S ribosomal protein S10 alpha, chloroplastic
- Chain BN
- 30S ribosomal protein S14, chloroplastic
- Chain BV
- Ribosome-binding factor PSRP1, chloroplastic
Coloring options: