IL_6ERI_167
3D structure
- PDB id
- 6ERI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CAC*GAAG
- Length
- 7 nucleotides
- Bulged bases
- 6ERI|1|BA|A|1442
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ERI_167 not in the Motif Atlas
- Geometric match to IL_5VCI_005
- Geometric discrepancy: 0.284
- The information below is about IL_5VCI_005
- Detailed Annotation
- Not an internal loop
- Broad Annotation
- Not an internal loop
- Motif group
- IL_64417.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 18
Unit IDs
6ERI|1|BA|C|1357
6ERI|1|BA|A|1358
6ERI|1|BA|C|1359
*
6ERI|1|BA|G|1441
6ERI|1|BA|A|1442
6ERI|1|BA|A|1443
6ERI|1|BA|G|1444
Current chains
- Chain BA
- 16S ribosomal RNA
Nearby chains
- Chain AA
- Large subunit ribosomal RNA; LSU rRNA
- Chain Az
- Ribosome-recycling factor, chloroplastic
- Chain BL
- 30S ribosomal protein S12, chloroplastic
- Chain BV
- Ribosome-binding factor PSRP1, chloroplastic
Coloring options: