IL_6ERI_181
3D structure
- PDB id
- 6ERI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UGUAG*UGAGA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ERI_181 not in the Motif Atlas
- Homologous match to IL_5J7L_027
- Geometric discrepancy: 0.1329
- The information below is about IL_5J7L_027
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.7
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 14
Unit IDs
6ERI|1|BA|U|529
6ERI|1|BA|G|530
6ERI|1|BA|U|531
6ERI|1|BA|A|532
6ERI|1|BA|G|533
*
6ERI|1|BA|U|706
6ERI|1|BA|G|707
6ERI|1|BA|A|708
6ERI|1|BA|G|709
6ERI|1|BA|A|710
Current chains
- Chain BA
- 16S ribosomal RNA
Nearby chains
- Chain BH
- 30S ribosomal protein S8, chloroplastic
- Chain BL
- 30S ribosomal protein S12, chloroplastic
- Chain BO
- 30S ribosomal protein S15, chloroplastic
- Chain BQ
- 30S ribosomal protein S17, chloroplastic
Coloring options: