IL_6FEC_069

3D structure

PDB id

6FEC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human cap-dependent 48S pre-initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

6.3 Å

Loop

Sequence

UACGCG*CCCCCA

Length

12 nucleotides

Bulged bases

6FEC|1|A|C|1433

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FEC|1|A|U|1404
6FEC|1|A|A|1405
6FEC|1|A|C|1406
6FEC|1|A|G|1407
6FEC|1|A|C|1408
6FEC|1|A|G|1409
*
6FEC|1|A|C|1429
6FEC|1|A|C|1430
6FEC|1|A|C|1431
6FEC|1|A|C|1432
6FEC|1|A|C|1433
6FEC|1|A|A|1434

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain H

40S ribosomal protein S16

Chain R

40S ribosomal protein S19

Chain h

40S ribosomal protein S20