IL_6FEC_102
3D structure
- PDB id
- 6FEC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human cap-dependent 48S pre-initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.3 Å
Loop
- Sequence
- ACUA*UUCU
- Length
- 8 nucleotides
- Bulged bases
- 6FEC|1|A|C|1399, 6FEC|1|A|U|1400
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FEC_102 not in the Motif Atlas
- Homologous match to IL_8P9A_445
- Geometric discrepancy: 0.4489
- The information below is about IL_8P9A_445
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_78800.2
- Basepair signature
- cWW-cSH-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
6FEC|1|A|A|1398
6FEC|1|A|C|1399
6FEC|1|A|U|1400
6FEC|1|A|A|1401
*
6FEC|1|A|U|1437
6FEC|1|A|U|1438
6FEC|1|A|C|1439
6FEC|1|A|U|1440
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain H
- 40S ribosomal protein S16
- Chain g
- 40S ribosomal protein S3
- Chain h
- 40S ribosomal protein S20
- Chain m
- Receptor of activated protein C kinase 1
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