IL_6FRK_005
3D structure
- PDB id
- 6FRK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UAAGUUC*GAUCAGUA
- Length
- 15 nucleotides
- Bulged bases
- 6FRK|1|1|G|232
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FRK|1|1|U|117
6FRK|1|1|A|118
6FRK|1|1|A|119
6FRK|1|1|G|120
6FRK|1|1|U|121
6FRK|1|1|U|122
6FRK|1|1|C|123
*
6FRK|1|1|G|227
6FRK|1|1|A|228
6FRK|1|1|U|229
6FRK|1|1|C|230
6FRK|1|1|A|231
6FRK|1|1|G|232
6FRK|1|1|U|233
6FRK|1|1|A|234
Current chains
- Chain 1
- Canis lupus familiaris RNA, 7SL, cytoplasmic 1 (RN7SL1), SRP RNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain r
- Signal recognition particle subunit SRP72,Signal recognition particle subunit SRP72,Signal recognition particle subunit SRP72
- Chain u
- Signal recognition particle subunit SRP68
- Chain x
- Signal recognition particle 54 kDa protein
- Chain y
- SRP receptor alpha subunit
Coloring options: