IL_6FRK_009

3D structure

PDB id

6FRK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UGAACCG*CAAAA

Length

12 nucleotides

Bulged bases

6FRK|1|1|A|184, 6FRK|1|1|C|185, 6FRK|1|1|C|186

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FRK|1|1|U|181
6FRK|1|1|G|182
6FRK|1|1|A|183
6FRK|1|1|A|184
6FRK|1|1|C|185
6FRK|1|1|C|186
6FRK|1|1|G|187
*
6FRK|1|1|C|212
6FRK|1|1|A|213
6FRK|1|1|A|214
6FRK|1|1|A|215
6FRK|1|1|A|216

Current chains

Chain 1

Canis lupus familiaris RNA, 7SL, cytoplasmic 1 (RN7SL1), SRP RNA

Nearby chains

Chain q

Signal recognition particle subunit SRP19

Chain x

Signal recognition particle 54 kDa protein